Basic Information
Symbol
hsa_HOMER1_0002000
RNA Class
transcript (circRNA)
Alias
hsa-HOMER1_0035
Host gene
HOMER1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
5:78692646-78753191
UCSC (hg19)
Location (GRCh38)
5:79396823-79457368
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-44.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-50.24 kcal/mol
Frequency:
0.0002
Diversity:
71.33
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((.....))))(..((((((.((.....))))))))...((((......)))).(((((((((..(.(((((((((((...))).)))..))))))..)))))))))...((((((.(..(((((((..((..((((.....((((((.....)))))).....))))..))..)))....))))..).))))))...................(((((((.......))))))))
Thermodynamic Ensemble Prediction
((((.....}}}},..(((((({({.....}))))))},,{((({......}}}},{((((((((..(.(((({{{{(((...))).}}}..))))))..))))))))}...{(((((.(..(((({,{..{{|,{{({,,,,.((((((.....)))))),}..,}}}}..)),.}}}....))))..).)))))}....,,,....,,,,,,.,(((((((.......))))))))
Forensic Context
No forensic context available.