Basic Information
Symbol
hsa_HOMER1_0002300
RNA Class
transcript (circRNA)
Alias
hsa-HOMER1_0043
Host gene
HOMER1
Type of circRNA
Exon-Exon
Location (GRCh37)
5:78693350-78697831
UCSC (hg19)
Location (GRCh38)
5:79397527-79402008
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-38.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-42.41 kcal/mol
Frequency:
0.0017
Diversity:
41.83
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(........)(...((..((.(((...(((((...((((.((...........)).))))..)))))..(((((.(((......))).)))))...(((((((...((.(((.(((((((......)).))))).)))..))...))))).))............(((.......((((............))))........)))...))).))..)).)
Thermodynamic Ensemble Prediction
(........}(...((,.((.(((,..{||||.,,{(({.((,{,.,,,....)).)))}..)))}}..{((({.(((......))).))))}...(((((((...((.(((.(((((((......)}.))))).)))..))...))))).))....{{......{{{.......{(((............})),........)))...))).})..}).)
Forensic Context
No forensic context available.