Basic Information
Symbol
hsa_HOMER1_0003100
RNA Class
transcript (circRNA)
Alias
hsa-HOMER1_0045
Host gene
HOMER1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
5:78711866-78746944
UCSC (hg19)
Location (GRCh38)
5:79416043-79451121
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-28.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-33.64 kcal/mol
Frequency:
0.0003
Diversity:
66.44
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.........((((.((((....((((((.(((................)))...))))))...))))))))((((.(((.......))).))))......................................................((((((...((.(((((...))))).))....))))))..))((((((......(((((((((.(((....))).))))......)))))....))))))
Thermodynamic Ensemble Prediction
((.........,,||.(({({,,.((((((.(({.,,.,........,,.}))...))))))...)))|(((,,.||||({.......|||....,,}....................................................,(((((,,,{{.{{(({...|||}}.}}....)})))}.}))||||||||{{.,{{{,(((((.(((....))).))))}..,},)))),....))},,}
Forensic Context
No forensic context available.