Basic Information
Symbol
hsa_chr5_0606400
RNA Class
transcript (circRNA)
Alias
hsa-HOMER1_0039
Host gene
HOMER1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:78736667-78736918
UCSC (hg19)
Location (GRCh38)
5:79440844-79441095
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-77.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-81.68 kcal/mol
Frequency:
0.0006
Diversity:
42.88
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((.(((....))).)))((((........)))).((((((((....((((..((.((((((....((((((....)))))))))))))).))))...((((..(....)..))))..))))))))...............))((((((.................((((((((..((..(((....)))..))..)))))))).........((.((((..(((.....)))..)))).))..))))))
Thermodynamic Ensemble Prediction
(((({.(((,...}}}.}},((((........)))).((((((((.{..((((..((.((((((....((((((....)))))))))))))}.}})},|.{{{{..{....)..)))).,))))))))......,,,.....}))((((((.................((((((((..({..(((....)))..}},.)))))))).{{.,.,{{,(.(((({.,,,..,}}))).,,))).}),.))))))
Forensic Context
No forensic context available.