Basic Information
Symbol
hsa_HOMER1_0005000
RNA Class
transcript (circRNA)
Alias
hsa-HOMER1_0025
Host gene
HOMER1
Type of circRNA
Intron-Intron
Location (GRCh37)
5:78777533-78781737
UCSC (hg19)
Location (GRCh38)
5:79481710-79485914
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-54.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-60.00 kcal/mol
Frequency:
0.0002
Diversity:
40.74
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..(((((.((((((((((((((....((((((..(((((..((......)).))))).))))))(((((......)))))....(((....))).....................................................(((((....))))).......((((.....))))..(((.........)))..)).)))))))))))).))))))))((...(((((.....))))).))
Thermodynamic Ensemble Prediction
(((..(((((.((((((((((((((....((((((..{((({..,{......,}.))))}.))))))(((((......)))))....{{,...,|||{....................................................(((((....)))))......,{{((,,...||},...||...,,,..}))),.))})))))))))))))))).,)))((...(((((.....))))).})
Forensic Context
No forensic context available.