Basic Information
Symbol
hsa_HOMER1_0002600
RNA Class
transcript (circRNA)
Alias
hsa-HOMER1_0016
Host gene
HOMER1
Type of circRNA
Exon-Exon
Location (GRCh37)
5:78697722-78734972
UCSC (hg19)
Location (GRCh38)
5:79401899-79439149
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-75.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-80.07 kcal/mol
Frequency:
0.0003
Diversity:
57.70
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
....((((.(((((((...(((((((((((......(((...........)))....................((((.((........)))))).((..(..(((((((......((((((......))))))......)))))))..)..)).......))))))))))).((((...(((...))).......)))).....(((.((((...)))).))))).)))))..................(((((...)))))(((......)))..(((((...)))))....))))
Thermodynamic Ensemble Prediction
....((((.((((((({.,(((((((((({......{{{......,,,,.|}}....,.,},}}.........((((.((........)))))).{{..(,,(((({{{......{(((((,.....)))))}......|||||||..|,.}}......,))))})))))),{(((...{{{...,}).......)))}......{{.||||,,,)))),))))).)))))..,,,....,,.......(((({...}))))(((......)))..(((((...)))))....))))
Forensic Context
No forensic context available.