Basic Information
Symbol
hsa_HOMER1_0003700
RNA Class
transcript (circRNA)
Alias
hsa-HOMER1_0047
Host gene
HOMER1
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
5:78734833-78807758
UCSC (hg19)
Location (GRCh38)
5:79439010-79511935
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-35.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-40.00 kcal/mol
Frequency:
0.0004
Diversity:
42.16
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((....(((((....))))).(((((((((..((((..(.((((..((((((.(((......))).))))))..)))).).))))..))))...)))))......................................................(((((.(......).))))).........((((.((........))))))((((...)))).)))(.....((((((......))))))......)
Thermodynamic Ensemble Prediction
({,{({.(((((....))))).{((((((((..((((..{.((((..((((((.(((......))).))))))..)))).}.))))..)))}...}))}}......................................................(((((.(......).)))))...},,}))(({{(((({....,...,|,|,(({...}}||{{......}}}|{{{|}.,,}.}}))}))))))))
Forensic Context
No forensic context available.