Basic Information
Symbol
hsa_chr5_0606700
RNA Class
transcript (circRNA)
Alias
hsa-HOMER1_0042
Host gene
HOMER1
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
5:78759435-78759659
UCSC (hg19)
Location (GRCh38)
5:79463612-79463836
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-37.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-41.91 kcal/mol
Frequency:
0.0015
Diversity:
43.64
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.....))(.........((((....(((.((((...(((((......))))).))))))))))).........((((.....))))..((((((..((((......((((((..........(((((((.....((((...))))....)))))))........(((.(((..((((....)))).))).)))....))))))......)))).))))))..)
Thermodynamic Ensemble Prediction
{(..,..,,,.........{(((..,.{((.((((...(((((......))))).))))))})))}........,|||,....,|}}|{,(({{((,.((((......((((((..........(((((((.....((((...))))....)))))))........(((.(((..(({{....))}}.))).)))....)))))),,,,..)))}.))))),.})
Forensic Context
No forensic context available.