Basic Information
Symbol
hsa_ITCH_0013100
RNA Class
transcript (circRNA)
Alias
hsa_circ_0059940
hsa_circITCH_024
hsa-AL109923_0084
Host gene
ITCH
Type of circRNA
Exon-Exon
Location (GRCh37)
20:33012286-33026436
UCSC (hg19)
Location (GRCh38)
20:34424480-34438631
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-40.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-44.99 kcal/mol
Frequency:
0.0010
Diversity:
37.03
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(.(((..(((......))).))).)(.((((((....((..((....))...))....)))))).......((((......))))....((((.......((((((..(((((((...))).)))).))))))...((((((((........(((.(.....).))).......)))))))).))))................)
Thermodynamic Ensemble Prediction
(.(((.,(((......})).))).}(.((((((....{{..{(....))...}},...))))))....,..((((......)))).,,.((((.......((((((..((((((,...,)).)))).))))))...((((((((........(((.{.....}.))).......)))))))).}},,.,,,..........,,)
Forensic Context
No forensic context available.