Basic Information
Symbol
hsa_ITCH_0021500
RNA Class
transcript (circRNA)
Alias
hsa_circ_0059950
hsa_circITCH_043
hsa-AL109923_0070
Host gene
ITCH
Type of circRNA
Exon-Exon
Location (GRCh37)
20:33045195-33057925
UCSC (hg19)
Location (GRCh38)
20:34457390-34470120
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-52.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-57.94 kcal/mol
Frequency:
0.0001
Diversity:
70.19
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...........((((.((..((((((((.((.(((((............))))).)).))..((((.....))))......(((((((......))).....)))).((((...((.((((.....(.(((((((...((((....))))...))))))).)...((((..(......)..)))).....)))).)).))))....)))))).........(((((..(((((((((.((((..(.....)..)))).))))....)))))..))))))).))))..
Thermodynamic Ensemble Prediction
...........((((.({..((((((((.{{.(((((............))))).)).}}..((((.....))))...,..,{((((,......,}}....,||},,(({{..,||.|||{..{{.{.(((((((,,,({{{...,))))...})))))).}...{(((..{......,..}}}}.....}}}|.}}.}}))....)))))).........(((((..{((((((((.((((..(|...,)..)))).)))),...)))))..))))))).))))..
Forensic Context
No forensic context available.