Basic Information
Symbol
hsa_ITCH_0029000
RNA Class
transcript (circRNA)
Alias
hsa_circ_0008686
hsa_circITCH_064
hsa-AL109923_0037
Host gene
ITCH
Type of circRNA
Exon-Exon
Location (GRCh37)
20:33068404-33069011
UCSC (hg19)
Location (GRCh38)
20:34480599-34481206
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-46.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-51.80 kcal/mol
Frequency:
0.0001
Diversity:
88.02
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((..(((((((....((((.(((.((((((........)))..........))).)))))))....)))..))))(((((..........(((.((((((((((.................)))))))))))))........)))))((((....((((..((((........))))..))))...))))............)))))(.((((.((..(((....)))..)).(((((((...................))))))).)))))
Thermodynamic Ensemble Prediction
((((({{(({{(((,...((((.(((.{{{(((........}))..........})).}}}}))}....))}..||||.(((((((({...})))}.))))||||{{,,.{{{({|{((.((((..,,.(((......}}).....))))))))))}}||||,,{{{{...,,,.,}}}},,},,,,,..,})}.})}}},....)))))(.((((.((..(((....)))..)).{{(((((.,.....,,,,......,.))))}}}.)))))
Forensic Context
No forensic context available.