Basic Information
Symbol
hsa_ITCH_0000400
RNA Class
transcript (circRNA)
Alias
hsa-ITCH_0079
Host gene
ITCH
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
20:32951825-32996598
UCSC (hg19)
Location (GRCh38)
20:34364019-34408792
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-28.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-32.10 kcal/mol
Frequency:
0.0040
Diversity:
38.49
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(..........................)(((.((((((..((((((((....)))).))))....((((((((....)))))))).(((.......))).........................................................((((((((............))))..)))).(((......))).......(((.....(((............)))...)))..)))))).)))
Thermodynamic Ensemble Prediction
{.................,.||..,,,|({{.{{{{((,,((((((((....)))).))))....((((((((....)))))))).(((.......)))...................................................|||,..{{{(,{{{,,.,.,,,,,}.}}},..)))).(((......))).......{{{.....{,{......,,,...}}),..}},..)))))}.}}}
Forensic Context
No forensic context available.