Basic Information
Symbol
hsa_ITCH_0004400
RNA Class
transcript (circRNA)
Alias
hsa-ITCH_0066
Host gene
ITCH
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
20:32981576-32996598
UCSC (hg19)
Location (GRCh38)
20:34393770-34408792
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-49.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-55.37 kcal/mol
Frequency:
0.0001
Diversity:
68.78
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.(((((((((((..(((((....(((.((....)))))....)))))..)))).......(((((((..((((.........))))..))))).))......((((((((.(((((......((.((((((............(((((....))))).)))))).)).))))).))))).)))((((.(((......))).......((........))....)))))))).))).)))((........))
Thermodynamic Ensemble Prediction
(((.(((,,((((((..,,(((({..,,}}||}...,))))},.,,,{((((((||{((..,,(((((((..((((,......,.))))..))))).)).}}..))))))))))|,,,{..,...,{,{{,{{{...,..,.....{((((....}))),|}||||},,,.},,||,,||}}.,.})))}.(((......))).......,{..............,},,,}}}.))).)))((........))
Forensic Context
No forensic context available.