Basic Information
Symbol
hsa_ITCH_0011100
RNA Class
transcript (circRNA)
Alias
hsa-ITCH_0015
Host gene
ITCH
Type of circRNA
Exon-Exon
Location (GRCh37)
20:33001548-33095713
UCSC (hg19)
Location (GRCh38)
20:34413742-34507908
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-83.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-89.32 kcal/mol
Frequency:
0.0001
Diversity:
90.41
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((..(((((.......))))).)))((..((((((((....((((....(((((((...((......))...)))))))....))))...)))....((((((..(((((((...)))).....)))..))))))..((((((.(((((.((((.(((....))))))).)((((((((((......)))))......))))))))).))))))(((((((....((...((((.(((((((.(((((((.....)))))))..(((((.........))))).((((.....))))....)))))))..))))....))...))))))))))))..))
Thermodynamic Ensemble Prediction
(((..(((((.......))))).)))((..((((((((....((((....(((((((...((......))...)))))))....))))...}}}....{|{{{({{({(((((...))))}}}}},)}..}||||}.,((((((,(((,,,,,{{,{{{....}}|,|}},{{{(({(((((......)))))......)))))),}|,}}}}}}(((((({....{{...((((.(((((((.{{{({,{{..{{|||||,...(((((.........))))).||||},.}},}},.)),)))))))..)))).,,,)).,.))))))))))))..))
Forensic Context
No forensic context available.