Basic Information
Symbol
hsa_chr20_0093000
RNA Class
transcript (circRNA)
Alias
hsa-ITCH_0126
Host gene
ITCH
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
20:33015218-33015592
UCSC (hg19)
Location (GRCh38)
20:34427412-34427786
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-61.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-70.90 kcal/mol
Frequency:
0.0000
Diversity:
107.58
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.........((((((((((.((((...(((((........(((((((.((((..(....)..))))..)))........................((((.((((((((..((((((....(((..((((........))))...........)))..))))))..)))))))).))))......((((((.(((((..(((...)))..)))))((((((...((((....))))....(((((((.(((((.......)))))((((.......)))).......)))))))..........))))))...)))))).....)))).......)))))...)))).).)))))))))((.(((....))).)).
Thermodynamic Ensemble Prediction
{......|,((((((((((.((((...(((({........(((({,..,{{|.,{....,.,|||,..}}}|..................,{{{(((((.((((((((..{(((((....{((..{{{(,,..,,..,}}),,.........})),.))})))..))))))))}))}},....,(((({{.,{{{{..{{{...))),.))}||((((((...((((....))))....(((((((.(((((.......))))}{(((.......)))}.......)))))))......,,..))))))},.}})))}.....)))).......)))))...)))).))}))))))))}}}|{{....}}}..,}
Forensic Context
No forensic context available.