Basic Information
Symbol
hsa_LIN54_0002700
RNA Class
transcript (circRNA)
Alias
hsa_circ_0127105
hsa_circLIN54_010
hsa-LIN54_0049
Host gene
LIN54
Type of circRNA
Exon-Exon
Location (GRCh37)
4:83860692-83891622
UCSC (hg19)
Location (GRCh38)
4:82939539-82970469
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-138.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-151.28 kcal/mol
Frequency:
0.0000
Diversity:
170.83
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.(((((((................))))))).))(..((....(((((.((.((((...(((((((..((.....................))..))))))).........((.((.(((....))).)).)).......(((((((.....(((((((.......(((((........)))))......)))))))..((((((((......((((((.((((........(((((((........)).))))).(((((((...........)))))))(((((.(......).)))))(((......)))..(((.((.(((..(..(((......)))..)..)))...)).))).......(.((((((....)))))).)...)))).))))))....))))))))..(((..(((((.(....((((((..................))))))......((((....))))).)))))..)))...(((.......)))........))))))).........((..((((.(((...((((((....))))(((((((((........))))).))))))...)))))))..))...(((...))))))))))))))))..)
Thermodynamic Ensemble Prediction
((.((((({{......{{{,......||}}}}),,,,..|||,..,,,,..,{{(((,.,{(((((({.,(({{.{,,,,.......,.....,,..)),,,},.........{{.,{.(({....})}.,|.||{......|||,{{{.....{((((((.,,....(((((.,....,.))))).....,))))))}..((((((((.....{(((((({((({........(((((((........)),})))).(((((((.,,....}...)))))))(((((.{......).)))))(({......))),}}}}.}}}}||.....,((......}}}..{,.,,,...}}..||...||..{.((((((....)))))).,.},))||{},,,,,.,,,)))))))).,(({..{||||......||||||.,,,,.............}}}}},......{(((....}))}|.}}}}}..,}}...(((.......))).},.,,,,))))}}}.,,}}}..,||}},||(,,,,...{{((((....))}|(((((((((,.......})))),,))))),..,)))))},.)),}}|||,..,)},}})))})))),),})
Forensic Context
No forensic context available.