Basic Information
Symbol
hsa_LIN54_0003500
RNA Class
transcript (circRNA)
Alias
hsa_circ_0127106
hsa_circLIN54_012
hsa-LIN54_0013
Host gene
LIN54
Type of circRNA
Exon-Exon
Location (GRCh37)
4:83867411-83867627
UCSC (hg19)
Location (GRCh38)
4:82946258-82946474
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-44.40 kcal/mol
Thermodynamic ensemble
Free Energy:
-48.24 kcal/mol
Frequency:
0.0020
Diversity:
23.32
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((.....(((((((.......(((((........)))))......)))))))...............(((((((((((.........(((((((........)).))))).(((((((...........)))))))(((((.(......).)))))(((......)))))))).)))))).............))))..))((........))
Thermodynamic Ensemble Prediction
((((((.....(((((((.......(((((........)))))......)))))))...............(((((((((((,,.......(((((((........)),,)))).(((((((.,,....}...)))))))(((((.{......).))))){{{......)))))))).)))))).............))))..))((........))
Forensic Context
No forensic context available.