Basic Information
Symbol
hsa_LIN54_0005500
RNA Class
transcript (circRNA)
Alias
hsa_circ_0003148
hsa_circLIN54_004
hsa-LIN54_0003
Host gene
LIN54
Type of circRNA
Exon-Exon
Location (GRCh37)
4:83891480-83900159
UCSC (hg19)
Location (GRCh38)
4:82970327-82979006
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-37.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-42.31 kcal/mol
Frequency:
0.0003
Diversity:
66.99
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((..(((((.(((.((((.......((((.(((.(((........((((..((((((..............))))))))))))).)))))))........))))....(((.((....)).)))))).)))))...))))((......((.......((((((..........(((.......(((((((..((.....................))..)))))))......)))..........)))))).....)).....))
Thermodynamic Ensemble Prediction
((.((((.{,.,{.,.....,,......,(((((((((({,,....{((((..((((((..............))))))))))).}.||}.|{{,.......))},{((((((((.(((((..{{{.{(({{{{,....|||{,......||}}}}}..,..,,,}}}....))))).)))...))))))})))))))))}.........,,,.......,}}............)))).))((....{(((.......)))}..))
Forensic Context
No forensic context available.