Basic Information
Symbol
hsa_LIN54_0004000
RNA Class
transcript (circRNA)
Alias
hsa-LIN54_0022
Host gene
LIN54
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
4:83867411-83882629
UCSC (hg19)
Location (GRCh38)
4:82946258-82961476
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-66.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-71.62 kcal/mol
Frequency:
0.0001
Diversity:
51.17
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.(((........))).))(...(((..((((((.(((((((.((((((.((((........((.(((....))).))))))...)))))).)....(((((((.......(((((........)))))......)))))))...............(((((((((((.........(((((((........)).))))).(((((((...........)))))))(((((.(......).)))))(((......)))))))).)))))).....))))))...........)))))).))))
Thermodynamic Ensemble Prediction
((.(((........))).))(...(((..((((((.(((((({,((((((.({((........((.(((....))).))}})).,.)))))).,....(((((((.......(((((.,....,.)))))......)))))))...............(((((((((((,,.......(((((((........))}})))).(((((((.,,....}...)))))))(((((.{......).))))){{{......)))))))).)))))).....})))))...........)))))).))))
Forensic Context
No forensic context available.