Basic Information
Symbol
hsa_CD44_0003800
RNA Class
circRNA
Alias
hsa_circ_0006564
hsa_circCD44_012
hsa-CD44_0020
Host gene
CD44
Type of circRNA
Exon-Exon
Location (GRCh37)
11:35218293-35219793
UCSC (hg19)
Location (GRCh38)
11:35196746-35198246
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-55.3 kcal/mol
Thermodynamic ensemble
Free Energy:
-59.77 kcal/mol
Frequency:
0.0007
Diversity:
53.73
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((((((((((....)))).(((...)))(((.((((((((.((......(((((.......))))))).)))))))))))..))))))))(.......(((((((((..........((..(((((((((..........)))))((((((....))))))))))..)).......)))))))))..((..((((.((....))...))))..)).((..(((..(((((........)))))..)))..)))
Thermodynamic Ensemble Prediction
(((((((({({,...,|||}.,,|,..)))(((.((((((((.((,.....{((((.......))))))).)))))))))))..))))))))(.......(((((((((........,.,,..(({((((({..,,,,{,..}}}},((((((....)))))))))}..))..,....)))))))))..((..((((.,,....}}...))))..)).{(..{{(..(((((........)))))..)))..}})
Forensic Context
No forensic context available.