Basic Information
Symbol
hsa_CD44_0007100
RNA Class
circRNA
Alias
hsa_circ_0021727
hsa_circCD44_020
hsa-CD44_0002
Host gene
CD44
Type of circRNA
Exon-Exon
Location (GRCh37)
11:35222629-35226187
UCSC (hg19)
Location (GRCh38)
11:35201082-35204640
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-75.5 kcal/mol
Thermodynamic ensemble
Free Energy:
-82.31 kcal/mol
Frequency:
0.0000
Diversity:
79.39
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((((............(((((....((((......(((........)))......)))).....))))).......((((...((((((((((((.((.((....)).)).))))((((((.......((((....))))...........((((...)))).........(((...((.(((..(((((...)))))..))))).))).........)))))).((.(......))).......))))))))..)))).))))(((((.(((..........((.(((((....))))).))....((((..((.................)).))))...........)))..)))))
Thermodynamic Ensemble Prediction
((((...........,(((((..,.((((......(((........)))......)))).....})))).......((((...((((((({((((.((.((....)).)).)))){(((({,,....|{{{,....||||......{{...((((...)))).,.......{{{..,((.(((..(((((...)))))..)))}}.)}).........)))))}.,,.......,||,....}},))))))))..)))}.))))(((((.{((....}|....((.(((((,,..}}|||,}|....,{{.,,||}}}},,,.,,,...,.....||||.,,,.......)))..)))))
Forensic Context
No forensic context available.