Basic Information

Symbol
hsa_CD44_0010000
RNA Class
circRNA
Alias
hsa_circ_0021739 hsa_circCD44_036 hsa-CD44_0014
Host gene
CD44
Type of circRNA
Exon-Exon
Location (GRCh37)
11:35227659-35231601 UCSC (hg19)
Location (GRCh38)
11:35206112-35210054 UCSC (hg38)
External Database
circbank circBase

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-64.7 kcal/mol
Thermodynamic ensemble
Free Energy: -70.49 kcal/mol
Frequency: 0.0001
Diversity: 90.73
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...((((.(((........((.(((.......))).)).........)))...))))....((((((...((((..((((..((((.............))))..))))..))))..))))))((((((.((...((...(((.(((..(((....((((..(((((.................))))).))))....)))..))).)))))...)))))))).............(((((((......((((...)))).........((((..(((((.(...........).)))))...)))))))))))..........
Thermodynamic Ensemble Prediction
..{((((.(((.......,((.(((.......))).)).........)))...)))).,..{(((((...((((..((((..((((.............))))..))))..))))..)))))}((((({,((.,.({,,{{,,.|||..|{{....,,||||,{|{|.|||{....{{{{{{...,))))))|||||||,},|},},}..)},..)))))))),........,,,|({((({,..,|||,((({{,|||,.........}}})}))}|}||{{{{..........}}}.....)))))})))))..........
Forensic Context

No forensic context available.