Basic Information
Symbol
hsa_RP11-856F16.2_0000300
RNA Class
transcript (circRNA)
Alias
hsa-AMOTL1_0040
Host gene
Amotl1
Type of circRNA
Exon-Exon
Location (GRCh37)
11:94607449-94607712
UCSC (hg19)
Location (GRCh38)
11:94874284-94874547
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-85.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-88.26 kcal/mol
Frequency:
0.0059
Diversity:
64.28
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.(((..((.....(((((......(((((((....))))))).(((.((((.....(((((....)))))))))))).))))).....))..))).))((...(((((.......(((((((((((((((.........)).)))))))..)))))).....)))))(((((((((.......)))))....(((.(((...((.(((.((.((((...)))).)).))).))...))).)))......)))).......))
Thermodynamic Ensemble Prediction
((,({(.,((.....{((((.....,{((((((....}))))}||(((.((((.....(((({....)))))))))))).))}}},,,,,||,.|||,|}((,,.(((((.......(((((((((((((((.........)).)))))))..)))))).....)))))(((((((((.......))))),...|{{,|||.,.{{.|||,{|,{{||,,,)))),}),))}.))...))),)))......}}))......,))
Forensic Context
No forensic context available.