Basic Information
Symbol
hsa_chr21_0025600
RNA Class
transcript (circRNA)
Alias
hsa-APP_0083
Host gene
APP
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
21:27253458-27254011
UCSC (hg19)
Location (GRCh38)
21:25881147-25881700
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-105.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-118.30 kcal/mol
Frequency:
0.0000
Diversity:
198.70
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...((((.......((((((((.((((((((((...........(((((..((((....(((..((((.((.......)).))))...))))))))))))..(((((......)))))...((((((..(((....(((((((..............(((........((((((.....))).)))........)))...(((((....)))))(.((((.....)))).).)))))))(((((((......((((...((((((....(((((((((((((((..............))).))))...........)))))))).......((((((.....(((((.((((((......)))))).)))))....)))))).......))))))....))))....)))))))...........)))..))))))......((((........))))........(((((((((((((....)))))))))))))..))))))...)))).))).)))))))))...((((((((......)))...)))))
Thermodynamic Ensemble Prediction
,,,((((.......(((((((..{(({({({{.....,.....,,||||.{{{{{{..,(((.{{{|(,((.{{...({|.,.|||..||..|,|..,{{..(((((......)))))..}}..|,.}}},|}.,.|}}||||...}}},.,,}}}}}}.||||,,..,{(({|,.,..,}|.,.,,.......,,{,..(((((....))))),}|{{{.....}}}.|||}}}}.,,|,||||||{,{{,{(({,..,{{{{|....(((((({(,((((,...............}))}}),),,,,,......)))}}})}},,.,.,,,{{||.....(((((.((((((......)))))).)))))..,,||||||{{{{{,,|||||||,.,,}}},...{|{{,,...))}}....,{|||||||||,..}}},.,,},,|||...,,})}}}.}}}.|{||{((((((((....))))))))))))}.,}},}}},}}))))})))})}))))}}},|||||{,|{|,}....})),,,,))))
Forensic Context
No forensic context available.