Basic Information
Symbol
hsa_APP_0005600
RNA Class
transcript (circRNA)
Alias
hsa-APP_0146
Host gene
APP
Type of circRNA
Exon-Exon
Location (GRCh37)
21:27327941-27347532
UCSC (hg19)
Location (GRCh38)
21:25955627-25975219
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-84.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-90.08 kcal/mol
Frequency:
0.0001
Diversity:
36.42
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((...(((((..((((.(((..(((((.(((((.........(((.(((.(((((((.....((.((((((.((((..(((((.....)))...))..)))))))))).)).....))...)))))))))))..))))))))))..((.(((.((.(((((((((...(((((..((..((.(((((.............))))).))........))..)))))...)))))))))))...))).))))).))))...)))))....))(.......)
Thermodynamic Ensemble Prediction
((...(((((..((((.(({..(((({((((((....,,,{.{{(.{(,{((((,,(.....((.((((((.((((..(((((.....)))...))..)))))))))).)).....}}.},))))}))))))..))))))))))..((.(((.{(,(((((((((.,.(((((..{(..({.(((((..........,..))))).})........}}..))))).,.)))))))))})...))).))}}),)))}...)))))....))(.......)
Forensic Context
No forensic context available.