Basic Information
Symbol
hsa_APP_0007000
RNA Class
transcript (circRNA)
Alias
hsa-APP_0158
Host gene
APP
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
21:27347383-27369756
UCSC (hg19)
Location (GRCh38)
21:25975070-25997441
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-122.50 kcal/mol
Thermodynamic ensemble
Free Energy:
-132.19 kcal/mol
Frequency:
0.0000
Diversity:
107.80
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((((((((((((...((((..(((((.(..(((((.....)))))...(((((..(((......))).)))))....((((....((((.(((..(((.....))).))).))))..)))).....).))))).)))))))))))..))))))).((............((((((((..(((((....)))))..)...........(((((..((....))...)))))..((((((....((.......))..))))))...((((((((........)))).))))..(((((........))))))))))))...(((((.(((((.........(((.(((.(((((((.....((.((((((.((((..(((((.....)))...))..)))))))))).)).....))...)))))))))))..))))))))))....))
Thermodynamic Ensemble Prediction
(,{((((((((({{,..,{({{..(((((....(((((.....)))))...(((((..,{|,,,..,|||{|}}||,...,,,,....((((.(((..(((.....))).))).)))),,}}),,,}},).))))).}}))}}}})}}..))))))||,|,,,,,,.,.{{{((.,,,,,.)||||{.,}.}},}})(((((.{,.....(((((..((....}},,.)))))..((((((....{{.......}}..))))))...((((((((........))))||)))..(((((..,,,...}}}},}}}))))),.{(({{((((((....,,,{.{{(.{(,{((((,,(.....((.((((((.((((..(((((.....)))...))..)))))))))).)).....},.},))))})))))),.))))))))))})))))
Forensic Context
No forensic context available.