Basic Information
Symbol
hsa_chr21_0027000
RNA Class
transcript (circRNA)
Alias
hsa-APP_0152
Host gene
APP
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
21:27348296-27354780
UCSC (hg19)
Location (GRCh38)
21:25975983-25982467
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-41.80 kcal/mol
Thermodynamic ensemble
Free Energy:
-45.29 kcal/mol
Frequency:
0.0035
Diversity:
40.76
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((((.....)))))..((...(((...(((((.((......))..))))).....(((((.((((((((((...(((((.......))))).((((..(((((.((....)).)))))..))))(((((....)))))..))))..)))))))))))....))).)).
Thermodynamic Ensemble Prediction
,(((((.....)))))..({...(((...(((((.{{.,....))..))))).....,((((.(((((((({{..,((({{,,,,...|||},,{{{{..{((((.((,...,,.}}))).,)))||{|||..,,))}}))))}}}..)))))))))))....))).)}.
Forensic Context
No forensic context available.