Basic Information
Symbol
hsa_AP001439.2_0000100
RNA Class
transcript (circRNA)
Alias
hsa-APP_0084
Host gene
APP
Type of circRNA
Intron-Intron
Location (GRCh37)
21:27540311-27540528
UCSC (hg19)
Location (GRCh38)
21:26167993-26168210
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-25.90 kcal/mol
Thermodynamic ensemble
Free Energy:
-30.78 kcal/mol
Frequency:
0.0004
Diversity:
61.85
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
...........(((.....)))...((((.....)))).(((((((.((.((.(((....(((((....)))))........(((((...........(((((........))))).........)))))...((((....))))...(((..((((.((.......)).))))..))).....))))).)).)))))))..................
Thermodynamic Ensemble Prediction
((({,{.....{{{.....||},..((((.....)))).{{{{{||.||.{(,(({,...(((((....)))))........,,,....|}}}}}...(((((....,,,,}.,,,.......|,||,{{({.((((....}}}}...{{{..((((.{{.......)).)))},,)}}.....}}}}}.},.}})))}}.,,,,.,,,,........
Forensic Context
No forensic context available.