ForensicRNA
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hsa_SMARCC1_0001800
Basic Information
Symbol
hsa_SMARCC1_0001800
RNA Class
circRNA
Alias
hsa_circ_0065242
hsa_circSMARCC1_126
hsa-SMARCC1_0023
Host gene
SMARCC1
Type of circRNA
Exon-Exon
Location (GRCh37)
3:47651556-47651817
UCSC (hg19)
Location (GRCh38)
3:47610066-47610327
UCSC (hg38)
External Database
circbank
circBase
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-61.7
kcal/mol
Thermodynamic ensemble
Free Energy:
-65.81
kcal/mol
Frequency:
0.0013
Diversity:
48.89
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
COPY
((........)).(((....((((((..(((....(((....((((....))))..((((..((..(((........)))))..))))...)))..))).))))))..((((((...((((...((((......)).))...))))..))))))((((......(((.(((.(((((......(((.(((((...)))))...)))...........))))).))).)))......)))).................)))..
Thermodynamic Ensemble Prediction
COPY
{{.........{,(({....((((((..(((....(({....((((....))))..((((..(,.,(((........)))))..))))...}))..))).))))))..((((((...((((...((((......)).))...))))..))))))((((......(((.(((.,((((......(((.(((((...)))))...)))..........,}}})).})).}))...}..)))}...,,,,..........)}}..
Forensic Context
No forensic context available.