Basic Information
Symbol
hsa_CD44_0001200
RNA Class
transcript (circRNA)
Alias
hsa_circ_0006311
hsa_circCD44_004
Host gene
CD44
Type of circRNA
Exon-Exon
Location (GRCh37)
11:35201821-35211612
UCSC (hg19)
Location (GRCh38)
11:35180274-35190065
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-103.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-110.37 kcal/mol
Frequency:
0.0000
Diversity:
75.15
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((.((((((......(((.....((((((((...)))).)))).....))).(((((((.............((((((((((....................(((((((...)))))))........((((((......))))))..(((((.....)))))......(((.......(((((..(((((....(((..((((....))))...)))(((((....)))))))))).)))))......))).......(((((((.((((.....(((........)))..)))).........((.((((((........)))))).)).)))))))((((............)))).......))))))))))((((..(((.......)))...))))........)))))))..)))))).)))(...)
Thermodynamic Ensemble Prediction
(((.((((((......(((...(.(((({{((...}))}})))),,...})}.(((((((.............((((((((((....................(((((((...)))))))........((((((......))))))..(((((.....)))))...,..{{(......,(({{(..(((((..,,{{{..((((....))))...))}|{(((....)))},))))},|||||......}||,.....{(((((((.((((.....(((........)))..)})).,||.....((.((((((........)))))).)).)))))))|{{|............,))},,,....)))))))))),{{(,,(((.......)))..,))}}........)))))))..)))))).)))(...)
Forensic Context
No forensic context available.