Basic Information
Symbol
hsa_CD44_0000300
RNA Class
transcript (circRNA)
Alias
hsa-CD44_0041
Host gene
CD44
Type of circRNA
Exon-Exon
Location (GRCh37)
11:35160718-35201954
UCSC (hg19)
Location (GRCh38)
11:35139171-35180407
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-101.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-106.74 kcal/mol
Frequency:
0.0001
Diversity:
105.85
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((....(((((((..(((((.....))))).))))))).......(((((......(((.(((....)))..)))....)))))..((((..(((....((..(((.....)))..))...))).....))))..((((..(((((........(((((((.((.(((.((((((..(((((((.((........))..)))))))......)))))).))))).)))))))..)))))..))))....(((((..........)))))((((((........)))))).........(((((((...)))))))...)))))......
Thermodynamic Ensemble Prediction
,.,,,{({...(((((((..(((((.....))))).)))))))....,,,((,(({..{{.((({(((....||,.,|||..{{|||,|{,.{{{{{{,,...,{{,.{{|,..,{{{{,,|,..})))}...,|||}...||,..|||||...,.,},|||||||,||}|{{.||||{{}},|{|||{}||}.,}..}}),,})))}}||..,,.|)))},|.|||||.||,,,))}}}))))..,,,}}}.}|{(({..,.......}}}}|((((((........,,,,,,.,,,,,,,.(((((((...)))))))...,,,}),....,
Forensic Context
No forensic context available.