Basic Information
Symbol
hsa_CD44_0002200
RNA Class
transcript (circRNA)
Alias
hsa-CD44_0104
Host gene
CD44
Type of circRNA
Exon-Exon
Location (GRCh37)
11:35211382-35219793
UCSC (hg19)
Location (GRCh38)
11:35189835-35198246
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-43.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-47.02 kcal/mol
Frequency:
0.0045
Diversity:
35.94
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(...........)((.(((((.......((((.(((((((.......(((.....((((((((.((((.....(((........)))..)))).........((.((((((........)))))).)).)))))))).......))).......))))))).((((.......((((..(((.......)))...)))).....))))....)))).......))))).))
Thermodynamic Ensemble Prediction
(...........)((.(((((.......((((.(((((((.{,....{{(,....((((((((.((((.....(((........)))..)))).,|,.....{{.((((((........)))))).)).)))))))).,},...}}}.,,...}))))))).((((.......((((..(((.......)))...)))).....))))....)))).......))))).))
Forensic Context
No forensic context available.