Basic Information
Symbol
hsa_CD44_0003400
RNA Class
transcript (circRNA)
Alias
hsa-CD44_0086
Host gene
CD44
Type of circRNA
Intron-Exon-Intron
Location (GRCh37)
11:35218244-35223334
UCSC (hg19)
Location (GRCh38)
11:35196697-35201787
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-43.00 kcal/mol
Thermodynamic ensemble
Free Energy:
-48.09 kcal/mol
Frequency:
0.0003
Diversity:
62.21
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(((((((((((.......(((((...((((...))))...)).)))...))))))))...(((........))).((.(((((((((((........))))((((((...))))))(((((..((.((...((((...............))))...))..))...)))))..))))))).))...(((...((.(((..(((((...)))))..))))).)))...........)))........
Thermodynamic Ensemble Prediction
{{.((((((((.......(((((...((((...))))...))},))...))))))))...(((........))).{(.((((((,,((,.{{{{{..|(,((,((.({{,.,,)))|,||,}},|}..}}}|}||.}}},,,.|||....,||||,.||..||...||||...))))}},.,,...{{{..,((.(((..(((((...)))))..)))}}.)}).........,,},,..,,....
Forensic Context
No forensic context available.