Basic Information
Symbol
hsa_CD44_0005400
RNA Class
transcript (circRNA)
Alias
hsa-CD44_0106
Host gene
CD44
Type of circRNA
Intron-Exon
Location (GRCh37)
11:35219619-35231601
UCSC (hg19)
Location (GRCh38)
11:35198072-35210054
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-56.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-60.58 kcal/mol
Frequency:
0.0016
Diversity:
50.79
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(.(((.(((.(((.....))).))).))).)(((..((.(((......))))).((((((.......((((((....))))))......)))))).......((((..((((.((((.((....))...))))...(((((.((.(((.(((((.(((.....(((...((.....)).(((.....)))))).....))).)))))))).)).)))))..(((((..................))))).))))..))))..)))
Thermodynamic Ensemble Prediction
(.(((.(((.(((.....))).))).))).)(((..((.(((......)))}}.((((((.......((((((....))))))......)))))).......((((..((((.,{{{.....,,|,...})))..{(((((.{(.(((.(((((.(((....,|{{...({.....)}.(((.....)))||||...,))).)))))))).)}.)))))}.(((((.....,............))))).))))..))))..)))
Forensic Context
No forensic context available.