Basic Information
Symbol
hsa_CD44_0006000
RNA Class
transcript (circRNA)
Alias
hsa-CD44_0048
Host gene
CD44
Type of circRNA
Exon-Exon
Location (GRCh37)
11:35219668-35227790
UCSC (hg19)
Location (GRCh38)
11:35198121-35206243
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-56.70 kcal/mol
Thermodynamic ensemble
Free Energy:
-60.96 kcal/mol
Frequency:
0.0010
Diversity:
72.97
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((.((((((((.......(((((...((((...))))...)).)))...))))))))............))((..((((((((...((..((.((((((((..((((((..(((..(((((........((((.(((........((.(((.......))).)).........)))...)))).......))))).)))..)))))).......(((...(((...)))..)))))))))))))..))))))))))))
Thermodynamic Ensemble Prediction
((.{(((((({.....,.(((((...((((...))))...)),.},...))))))))...,,,..,,,.}}{{,.{(((((((...{{..((.(((((({{,.((((((..{{|,,{{{((....,..|((((.(((.......,((.(((.......))).)).........}))...))))...,|,,|)))}.|||..}||||}.{,,,..{{{...{{,..,)))..))))}}))))})),,))))))))))))
Forensic Context
No forensic context available.