Basic Information
Symbol
hsa_CD44_0008100
RNA Class
transcript (circRNA)
Alias
hsa-CD44_0038
Host gene
CD44
Type of circRNA
Exon-Exon
Location (GRCh37)
11:35223215-35226187
UCSC (hg19)
Location (GRCh38)
11:35201668-35204640
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-40.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-45.14 kcal/mol
Frequency:
0.0004
Diversity:
60.67
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(....)(((.......((((.....(((((..........((((...))))))))).......(((((((((..(((((...)))))..))((((...........))))....((.(......)))...((((.(((((...............))))).....))))...((.(((((....))))).))))))))).....))))................((((...........))))...)))
Thermodynamic Ensemble Prediction
(....|(((.{.....|{{{....,||({,.....,,...((((...)))),}}},....,,,{{((({(((..(((((...)))))..))|{,{|||........})))....{(.{...,,,||}...{{{{.(((((...............))))),,...,)),...((.(((((....))))).)),}))))).....))}}................{(((...........)))}..,)))
Forensic Context
No forensic context available.