Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_CDC14A_0006800

RNA Class

transcript (circRNA)

Alias

hsa-CDC14A_0006

Host gene

CDC14A

Type of circRNA

Exon-Exon

Location (GRCh37)

1:100905488-100933650 UCSC (hg19)

Location (GRCh38)

1:100439932-100468094 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-43.30 kcal/mol

Thermodynamic ensemble

Free Energy: -47.64 kcal/mol

Frequency: 0.0009

Diversity: 57.07

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((...((((..(((.......................((((((...((((.((((....))))))))....))))))((.(((((..(((((((..(((......)))..)))))))..)).)))))........((((.((.((..((((.(((.....)))..))))....)).)).))))))).)))).))))).

Thermodynamic Ensemble Prediction

.....(((((...((((..(((........,......,,,{{{..({{{{{.,.|||||{(((....)))}}||||...}}})))}},{{,{{..(((((((..(((......)))..)))))))..}}.}||||,.......,((({((.,{,,,,,,.{{{..,,,))).,})},.}}),..,},))))))).)))).))))).

Basic Information

Secondary Structure

Structure Prediction

Forensic Context