Basic Information

Symbol
hsa_CDK13_0010800
RNA Class
transcript (circRNA)
Alias
hsa_circ_0079936 hsa_circCDK13_027 hsa-CDK13_0028
Host gene
CDK13
Type of circRNA
Exon-Exon
Location (GRCh37)
7:40087420-40102699 UCSC (hg19)
Location (GRCh38)
7:40047821-40063100 UCSC (hg38)
External Database
circbank circBase

Secondary Structure

Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-37.50 kcal/mol
Thermodynamic ensemble
Free Energy: -43.02 kcal/mol
Frequency: 0.0001
Diversity: 59.29
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((............((((((...((.(((.........)))..))...))))))((.((..(((((..(((((....))))).))))).)).)).(((((..((((..(((((..((...((((((..((((((((......)))..)))).)..)))))).((((.(((...))).)))).....))...)))))))))..)))))...)))).)..((..........))
Thermodynamic Ensemble Prediction
..,((((.......,,||.({{(((.,,{(,(({.....,,..}}},,}}...}})))){(,{(..(((({..((({{....})))}.))))).}).)).(((((..((((..(((((..,{...((((((..((((((((......)))}.}))).)..)))))).((((.(({...})).)))).....}}...))))}))))..)))))...}}}}.,..,,..........,}
Forensic Context

No forensic context available.