Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_CDK13_0007900

RNA Class

transcript (circRNA)

Alias

hsa-CDK13_0142

Host gene

CDK13

Type of circRNA

Exon-Exon

Location (GRCh37)

7:40037113-40041630 UCSC (hg19)

Location (GRCh38)

7:39997514-40002031 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-19.00 kcal/mol

Thermodynamic ensemble

Free Energy: -21.98 kcal/mol

Frequency: 0.0079

Diversity: 28.80

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((....(((..((((....((((((......)).))))))))..)))...)))))((.(((.(((....((((((.....))))))....))).))).))...........((..(....((((...))))...)..))....

Thermodynamic Ensemble Prediction

.....(((((....{((..(((({..,{((,,{......})}))))))))..)))...))))){(,(((.(((....((((((.....))))))....))).))).))...........((..,....{(((...)))}..||..}),,..

Basic Information

Secondary Structure

Structure Prediction

Forensic Context