Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_CHD2_0021800

RNA Class

transcript (circRNA)

Alias

hsa-CHD2_0137

Host gene

CHD2

Type of circRNA

Exon-Exon

Location (GRCh37)

15:93487645-93515647 UCSC (hg19)

Location (GRCh38)

15:92944415-92972417 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-57.00 kcal/mol

Thermodynamic ensemble

Free Energy: -64.16 kcal/mol

Frequency: 0.0000

Diversity: 90.37

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((((((..(((((((((((............((....)).(((.((((((.(((((.........(((......)))..........))))).))))).).)))...)))))))...(((((.(((((((((((.(((((....))).).).)))))))).................))))))))....))))))))))(((((((..((.......))))))))).(((((((..((((((((.(((.(.....).))).))))).)))...)))))))))))))..

Thermodynamic Ensemble Prediction

.....(((((({(((((,,({{({(((,{{,,,,}}}....{(((.,.,..|.|}}|((({,(((({....,{{,,(.{,...,,|{{||....,,..,}})),|}}}}.|,|||,..}}))),}},.{|{,,|||{((((((((.({(((....})).).}.))))))))}..}}},}}}},....,)))))},}..}})))})))}}}(((((({..((.......}}})))))).(((((((..({{(((((.(((.{.....).))).))))).}))...)))))))))))))..

Basic Information

Secondary Structure

Structure Prediction

Forensic Context