Basic Information
Symbol
hsa_ABCA1_0005900
RNA Class
transcript (circRNA)
Alias
hsa-ABCA1_0109
Host gene
ABCA1
Type of circRNA
Exon-Exon
Location (GRCh37)
9:107574855-107576512
UCSC (hg19)
Location (GRCh38)
9:104812574-104814231
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-72.10 kcal/mol
Thermodynamic ensemble
Free Energy:
-78.19 kcal/mol
Frequency:
0.0001
Diversity:
54.91
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((((...))))).(.........(((((((((....(((((((.((...)))))))))))))))...)))....(((.((....(((((...((((((((........(((...((((..(((.((....)))))..)))).))).((((((((((((((.(((.(.(((.(((((.(((((...........))))).))))).)))).))).)).)))).))..))))))..))))))))....)))))....))))))
Thermodynamic Ensemble Prediction
.(((({...})))},{,{{........{((((((....(((((({,((...)))))))))))))))|((((({.,.,,,.,({{{(,.((,....(((((((.........))))))),,,,,|}.)))...}})))))))}..|(..(((((({(((((((.(((.,.(((,(((((.(((((...........))))).))))).)))).))).)).)))).)}..))))))..)}{(({(,.....))))))))))),..
Forensic Context
No forensic context available.