Basic Information
Symbol
hsa_chr21_0087800
RNA Class
transcript (circRNA)
Alias
hsa-DSCAM_0087
Host gene
DSCAM
Type of circRNA
Intergenic-Intergenic
Location (GRCh37)
21:42044303-42045084
UCSC (hg19)
Location (GRCh38)
21:40672377-40673158
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-144.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-158.83 kcal/mol
Frequency:
0.0000
Diversity:
198.85
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
(...)((((......(((((((...((((.............((((((((.(((((....(((.....(((((...........((((...(((((........)))))...)).))...........))))).)))....)))))))))))))...)))))))))))((.(((.((((((.(.((.....(((((((.((.(((((.(((..(((((..(((((((.....))))))).(((.....)))......................((((((.(.....).)))))).((((((((........((((((...))))))........)))))))).........(((.......)))............)))))..)))..))))))).)))))))(((((((.............................(((.(((((((((........................................(((.......(.(((.(......).))).).....)))........(((....))).))))))))).))).......((...............))....))))))).........................(((...((((.....((((((((................(((((.......)))))......)))))))).)))).)))........)).).)))))).))).)).....(((.(((((.................))))))))..........))))
Thermodynamic Ensemble Prediction
(...)((((.....{(({(((,...||||.},,,.....{{{{{{{,{{{{{((({,{{..{(({....}}},........{((({(.,..(((((........)))))}}.}}}},|}}}}}}}}},|{{}}}||}|..,{{{{,{{{{{{..{{{(,,{({{,...(({,(({(({,(({{{(({....(((((((.((.(((((.(((..(((((..(((((((.....))))))),(({...,,)}},,,...................{{((((,(,....)|))}}}),((((((((,,.,....((((((...)))))).....,,.)))))))).||.....,{{{...,,.,))}.......,,,..)))))..)))..))))))).))))))),||||||}}.,}}},.,,,.................(((..,,,,,,,...}}}.............}}}}...}}))..}}}}}}}.}}}}}.....,(.(({.,.....,).))}.}..,..}}},.......|||,,,.}||,|||||||||{||}.......||...............||....)),}},,.................,.......||{..,||||,,...{{{{{{{{..........{{....||{{{....,{{||||}..,...}}}|}|||.}|||,})),.......,,.,.}))))}.,,,.,......(((.(((((....,,....,,.....))))))))..........))))
Forensic Context
No forensic context available.