Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_ELAVL1_0001000

RNA Class

transcript (circRNA)

Alias

hsa-ELAVL1_0021

Host gene

ELAVL1

Type of circRNA

Intron-Exon-Intron

Location (GRCh37)

19:8032449-8054387 UCSC (hg19)

Location (GRCh38)

19:7967565-7989503 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-43.90 kcal/mol

Thermodynamic ensemble

Free Energy: -47.98 kcal/mol

Frequency: 0.0013

Diversity: 40.62

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((((......(((....))).....)))))))((((((.....((((((((...))))))))..(.(((.....))).)..(((((...............................................................))))).....((((.(((.((((((((((.((((..........)))))))).))...))))))).)))).....))))))............

Thermodynamic Ensemble Prediction

.....(((((((.,{{..(((....))),}...))))))}((((((.....((((((((...))))))))..,.{{(,,...,}},}..{((((...............................................................}}}}}.....((((.(((.((((((((((.((((........,.)))))))).))...))))))).))))...,.))}))},,,....,,},.

Basic Information

Secondary Structure

Structure Prediction

Forensic Context