Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_ELAVL1_0002300

RNA Class

transcript (circRNA)

Alias

hsa-ELAVL1_0031

Host gene

ELAVL1

Type of circRNA

Intron-Intron

Location (GRCh37)

19:8052265-8052543 UCSC (hg19)

Location (GRCh38)

19:7987381-7987659 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-116.30 kcal/mol

Thermodynamic ensemble

Free Energy: -121.29 kcal/mol

Frequency: 0.0003

Diversity: 51.10

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((((((((........))))))))((((((...))))))(((((((.((((((.........((.(((....))).))....((..(((((((((....(((((((.........((((((...)))))).((((((.(((...(((((((...)))))))..))).((((((((((((.((........)).)))...)))))))))..))))))..)))))))..)))))))))..))(((((((....))))))))))))))))))))...

Thermodynamic Ensemble Prediction

.....((((((((........))))))))((((((...))))))(((((((.((((((,,,,,,,,,(((((.,..(((.((((({.....(((....,))}..{((((((......,..,(((({...}))))}.((((((.(((...(((((({...}))))))..))).((((((((((((,((.{{...}},),))),.})))))))}}..))))))..)))))))))))).)))}))))){||{|||,,,,}}}}}}))))))))))))))...

Basic Information

Secondary Structure

Structure Prediction

Forensic Context