Basic Information
Symbol
hsa_AFF1_0000300
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0080
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:87869650-88053560
UCSC (hg19)
Location (GRCh38)
4:86948498-87132408
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-32.20 kcal/mol
Thermodynamic ensemble
Free Energy:
-36.85 kcal/mol
Frequency:
0.0005
Diversity:
27.20
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((((((.((((((..((.((((((........((.......)).....))))))..))))))))...)))))))..........(((....)))...................................................(((((............))))).(((.(((((((..................))))))).))).....(((.....)))....))..(.(((...))).)
Thermodynamic Ensemble Prediction
,{(.(((((((.((((({.{((.((((((........{(.......}}.....))))))..))))))))...))))))).},.....,.(((....)))...................................................(((((..........,.))}},.(((.(((((((..................))))))).))).....{{{{{...,))....},,...{{{...))).}
Forensic Context
No forensic context available.