Forensic RNA Knowledge Base

Basic Information

Symbol

hsa_EPS15_0002800

RNA Class

transcript (circRNA)

Alias

hsa-EPS15_0075

Host gene

EPS15

Type of circRNA

Exon-Exon

Location (GRCh37)

1:51829538-51887530 UCSC (hg19)

Location (GRCh38)

1:51363866-51421858 UCSC (hg38)

External Database

circbank

Secondary Structure

Generated by RNAfold

Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.

Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.

Minimum free energy

-35.90 kcal/mol

Thermodynamic ensemble

Free Energy: -39.89 kcal/mol

Frequency: 0.0016

Diversity: 44.86

MFE Structure Visualization

Structure Prediction

MFE Structure Prediction

.....((......(((((.((((..(((..((((......(((.((........(..(((((((..(((...(((....((((((((...))))))))..)))..)))..))).))))..)...((((((..((((.....)))).(((.((...((((..(((....))).))))...)).)))))))))......)))))....))))...)))..))))...)))))...)).

Thermodynamic Ensemble Prediction

.....{{......(((((.((((..(((..((((.,,.......|,......,,(,,{{({{((,.(((,..(({....((((((({...})))))))..))).,))}..})),)))}..,...((((((..((((.....)))).{((.((...((((..(((....))).))))...)).))}))))))..,,...,,,,}}..))))...)))..))))...)))))...}}.

Basic Information

Secondary Structure

Structure Prediction

Forensic Context