Basic Information
Symbol
hsa_AFF1_0001800
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0064
Host gene
AFF1
Type of circRNA
Intron-Intron
Location (GRCh37)
4:87905175-87905497
UCSC (hg19)
Location (GRCh38)
4:86984023-86984345
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-61.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-68.71 kcal/mol
Frequency:
0.0000
Diversity:
77.27
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((.....)))).((((((((((((((((((((((((..(((.(((((..((((.(((((...............))))).))))(((((....(((((......)))))...)))))..........((((((((..((((....))))))))))))..(((((((.(((((..((.....)).))))).)))))))))))).)))..(((((.....)))))....((((((.((.((((.........)))))).))))))......((.((................)).)).))))))))))))))))))))))))
Thermodynamic Ensemble Prediction
.((((.....)))).(((((((((((((((((((((((({{(({.(((({..{{{,.(((((,,........,}}..}))}}.}}}|(((((....(((((......})))).,.)))))}.........{(((((((..((({....}))))))))))),,(((((((.(((((.,{,.....)).))))).)))))))))))).||,..(((((.....)))))...}}||((({{{,{{{{,,,,,,,,.}}))))}),}))}...,.}},}}},.............,,,,,.)}))))))))))))))))))))))))
Forensic Context
No forensic context available.