Basic Information
Symbol
hsa_HOMER1_0001200
RNA Class
circRNA
Alias
hsa_circ_0129727
hsa_circHOMER1_011
hsa-HOMER1_0010
Host gene
HOMER1
Type of circRNA
Exon-Exon
Location (GRCh37)
5:78692646-78734972
UCSC (hg19)
Location (GRCh38)
5:79396823-79439149
UCSC (hg38)
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-97.3 kcal/mol
Thermodynamic ensemble
Free Energy:
-108.47 kcal/mol
Frequency:
0.0000
Diversity:
143.69
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
..((((((.(((((((...(((((((((((......(((...........)))....................((((.((........)))))).((..(..(((((((......((((((......))))))......)))))))..)..)).......))))))))))).((((...(((...))).......)))).....(((.((((...)))).))))).)))))..................(((((...)))))(((......)))..(((((...)))))....))))))..(((....(((.(((((..(((..........)))...))))).))).....(((.......((((............))))........)))...((((.(..((((((........(((.....(((....))).....)))......((........)).....))))))..)))))......)))
Thermodynamic Ensemble Prediction
{,((((,(.{{(((({|,,(((((({((((......(((.......,,..|}}....,.,},},.........((((.((........)))))).((..,.|{((({,,......{{{{(({....,||||||,,,,,,|||||||..{{,|}.....,}))}},))))))}|(((...{{{...,}).......))),.....,({.((({...)))).)))}}.}}}}}.,|||,,.,.,,}}}...{{|||..,||||,(((......))).,||||,..{|||||{...{(,(({.{((({{(......}},}}})}.}))..))...}))}}.}}...,||......,,{.......{{{{............}))}..,.,...))}...{{{..{..,{||..........(((.....(((....))).....)))......{{.........,.,},,)))}}},.,}},,......}))
Forensic Context
No forensic context available.