Basic Information
Symbol
hsa_AFF1_0004400
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0023
Host gene
AFF1
Type of circRNA
Intron-Exon
Location (GRCh37)
4:87967318-87968826
UCSC (hg19)
Location (GRCh38)
4:87046166-87047674
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-20.30 kcal/mol
Thermodynamic ensemble
Free Energy:
-23.89 kcal/mol
Frequency:
0.0029
Diversity:
27.86
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((........))(..(((....)))((((..........))))............((((((((((...........).)))..)))))).......((.((.....)).))(((((...)))))..)
Thermodynamic Ensemble Prediction
{({{{......}|}}|||...,||,{(((......},|||.}||...........((((((((({...........).)))..)))))).......||,{|,,,,,)).),(((((...)))))..,
Forensic Context
No forensic context available.