Basic Information
Symbol
hsa_AFF1_0004900
RNA Class
transcript (circRNA)
Alias
hsa-AFF1_0004
Host gene
AFF1
Type of circRNA
Exon-Exon
Location (GRCh37)
4:87967318-88005316
UCSC (hg19)
Location (GRCh38)
4:87046166-87084164
UCSC (hg38)
External Database
Secondary Structure
Generated by RNAfold
Minimum free energy (MFE) structure:
Secondary structure that contributes a minimum of free energy.
Secondary structure that contributes a minimum of free energy.
Ensemble properties:
Thermodynamic properties of the Boltzmann ensemble.
Thermodynamic properties of the Boltzmann ensemble.
Minimum free energy
-64.60 kcal/mol
Thermodynamic ensemble
Free Energy:
-68.51 kcal/mol
Frequency:
0.0018
Diversity:
25.07
MFE Structure Visualization
Structure Prediction
MFE Structure Prediction
((........))(..(((((..((.((((((......(((.(((......(((.(((((...((((.((......((.(((.(((((.((((((......))))))))))))))))((.(((((((............))))))).)).............)).))))......(((.((.(((...(((...((((....)))).))).))))).)))))))).))).((((.......))))))).)))(((((.....)))))..)))))))).)))))..)
Thermodynamic Ensemble Prediction
((........))(..(((((..((.((((((......(((.(((..,,,.(((.(((((...((((.{{......((.(((.(((((.((((((......)))))))))))))))),{.(((((((............))))))).}|.............)).))))......(((.(,{(((...(((...((((....)))).))).))))).)))))))).))).|||{.......}}}}))).)))(((((.....)))))..)))))))).)))))..)
Forensic Context
No forensic context available.